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ID 6476
Class Mammalia
Species Mouse
Tissue Heart
Sample Tissue
Disease type Normal
Cell type Mesenchymal cells
Cell type (subtype) Smooth muscle cells
Cell marker Col1a1, Col3a1, Acta, Dcn, Ddr2, vimentin4, Eln, Fn1, Tagln5
Frequency
PubMed ID 30283141
Journal Nature
SCI IF 49.962
Evidence aortic cells generated 5 clusters and better resolved specific cell types. For example, a cluster of mesenchymal cells that expresses vimentin4 and genes encoding secreted extracellular matrix proteins (Dcn, Col1a1, Ddr2, Col3a1, Eln, and Fn1) is present. The majority of these cells are fibroblasts, while a few are likely smooth muscle cells that express Acta2 and Tagln5, 6. Three Endothelial cells clusters are also present (Cdh5+ , Pecam1+ ), which are similar to the vascular Endothelial cellss (Cav1+ , Fabp4+ ) in the heart. Two of the clusters also express high levels of angiopoietin 1 receptor (Tek)7 , Endothelial cells specific molecular 1 (Esm1)8 , and Ehd39 . A cluster of antigen presenting cells is present (Ptprc+ , H2-Eb1+ , Cd86+), and the majority are most likely macrophages (Selplg+ , Cd14+ , Cd3e- , Cd19- ).
Title Single-cell transcriptomics of 20 Mouse organs creates a Tabula Muris
Authors Nicholas Schaum et al.
Date 2018.1
Data available GSE109774