Search | Result
| ID | 645 |
|---|---|
| Class | Mammalia |
| Species | Homo sapiens |
| Tissue | Blood |
| Sample | Blood |
| Disease type | Normal |
| Cell type | T cells |
| Cell type (subtype) | Cytotoxic T cells |
| Cell marker | CD3D, CD3E, IL7R, NKG7, GZMA, GZMK, CD8B, GZMH |
| Frequency | |
| PubMed ID | 29921301 |
| Journal | Genome Biology |
| SCI IF | 10.806 |
| Evidence | For most datasets, the determined thresholds are similar to those chosen by the Cell Ranger approach; however, the difference was notable for some datasets. For instance, for the 10x Human BMMC dataset (dataset 8), the hreshold determined by our approach recovers 1105 additional cells that show subpopulation-specific expression signatures (Fig. 4, Additional file 2 |
| Title | dropEst:pipeline for accurate estimation of molecular counts in droplet-based single-cell RNA-seq experiments |
| Authors | Petukhov et al |
| Date | 2018.7 |
| Data available | GSE65525 |
