Search | Result
ID | 6575 |
---|---|
Class | Mammalia |
Species | Mouse |
Tissue | Heart |
Sample | Tissue |
Disease type | NA |
Cell type | Adipocytes |
Cell type (subtype) | Adipocytes |
Cell marker | Adipoq, Acsl1, Adipor2, Acaca, Acss3, Acvr1c, Adrb3, 1700112E06Rik, 4732471J01Rik, 4930402H24Rik, 4930556N13Rik, 4931406C07Rik, 4933406I18Rik, Aacs, Abcd3, Acacb, Acadl, Acly, Aco2, Acox1, Acss2, Adam12, Adamts12, Adra1a, Agmo, Agpat2, Ahcyl2, Akap1, Aldh |
Frequency | |
PubMed ID | 31723062 |
Journal | JCI Insight |
SCI IF | 6.205 |
Evidence | Using t-distributed stochastic neighbor embedding (tSNE) (10), global dimension reduction was constructed from all samples to visualize clusters that were defined by cell-specific gene markers (Figure 1A and Supplemental Table 2). / To identify specific markers for each cluster and consequently annotate them with the respective heart cell type, we applied Seurat “FindAllMarkers� function using the AUCbased scoring classifier with default parameters. We used the default Wilcoxon’s rank-sum test for the specific cell type analysis. |
Title | Transcriptional heterogeneity of fibroblasts is a hallmark of the aging heart |
Authors | Ramon Vidal et al. |
Date | 2019.11 |
Data available | NA |