Search | Result
| ID | 6594 |
|---|---|
| Class | Mammalia |
| Species | Mouse |
| Tissue | Heart |
| Sample | Tissue |
| Disease type | NA |
| Cell type | Granulocytes |
| Cell type (subtype) | Granulocytes |
| Cell marker | 4933406I18Rik, Acaca, Acacb, Acsl1, Acss3, Acvr1c, Adipor2, Car3, Cdo1, Cfd, Chpt1, Cidec, Dbi, Ebf1, Efna5, Erbb4, Fabp4, Fam13a, Fry, G0s2, Ghr, Gm26917, Gphn, Ifi27, Immp2l, Lipe, Neat1, Negr1, Nfia, Nrg4, Pcx, Pde3b, Pik3r1, Plcb1, Plin1, Pnpla3, Ppar |
| Frequency | |
| PubMed ID | 31723062 |
| Journal | JCI Insight |
| SCI IF | 6.205 |
| Evidence | Using t-distributed stochastic neighbor embedding (tSNE) (10), global dimension reduction was constructed from all samples to visualize clusters that were defined by cell-specific gene markers (Figure 1A and Supplemental Table 2). / To identify specific markers for each cluster and consequently annotate them with the respective heart cell type, we applied Seurat “FindAllMarkers� function using the AUCbased scoring classifier with default parameters. We used the default Wilcoxon’s rank-sum test for the specific cell type analysis. |
| Title | Transcriptional heterogeneity of fibroblasts is a hallmark of the aging heart |
| Authors | Ramon Vidal et al. |
| Date | 2019.11 |
| Data available | NA |
