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ID 8947
Class Mammalia
Species Mouse
Tissue Thymic
Sample Tissue
Disease type Development
Cell type Natural killer T (NKT) cells
Cell type (subtype) Invariant nkt (inkt) precursors
Cell marker Itm2a, Sox4, Egr2
Frequency
PubMed ID 33288744
Journal Nat Commun
SCI IF 12.121
Evidence Differentially expressed genes (DEGs) in cluster 0 comprised several genes associated with lymphocyte activation and T cell differentiation (Fig. 2b), including , Pdcd1 (encoding PD-1), Cd27, Cd28, Cd69, Slamf6, Cd81, Ldhb and Bcl2 (coding for the anti-apoptotic protein BCL-2) (Fig. 2d). Several genes coding for transcription factors, such as Lef1 (ref. 19), Sox4 (ref. 20), Egr2 and Egr1 (ref. 8), Tox21, Id3 (ref. 22), Myb23, Ikzf1 and Ikzf2 (coding for IKAROS and HELIOS, respectively), including some that have been previously implicated in iNKT cell development, were highly expressed in stage 0 iNKT cells
Title Thymic iNKT single cell analyses unmask the common developmental program of Mouse innate T cells
Authors S Harsha Krovi et al.
Date 2020.12
Data available GSE152786, GSE160518