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ID 4404
Class Mammalia
Species Homo sapiens
Tissue Spleen
Sample Organoids
Disease type AIDS
Cell type Mast cells
Cell type (subtype) Mast cells
Cell marker TPSAB1, CTSG
Frequency
PubMed ID 32406872
Journal JCI Insight
SCI IF 6.205
Evidence We used t-distributed stochastic neighbor embedding (t-SNE) visualization of cells to reveal 10 major clusters (Figure 1A), based on marker gene expression for pDCs (e.g., enrichment of_LEC4C, _CF4) (25), mDCs (CD1C, _PI1) (26), macrophages (CD68, _D14) (27), NK cells (NKG7, _RF1) (28), ILCs (IL7R) (29), IDO+_yeloid cells (IDO1), mast cells (TPSAB1, _TSG) (30), CD34+_rogenitor cells (CD34), B cells (CD79A, _D19, due to incomplete depletion by the CD19 antibody), and erythroid cells (HBB, _BA2) (31), which may not have been completely lysed by the red blood cell lysis procedure (Figure 1, B and C; and_upplemental Table 1; supplemental material available online with this article;_ttps
Title Identification of pathogenic TRAIL-expressing innate immune cells during HIV-1 infection in Humanized Mouse by scRNA-Seq
Authors Liang Cheng et al.
Date 2020.6
Data available GSE148796