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ID 1949
Class Mammalia
Species Homo sapiens
Tissue Colon
Sample Tissue
Disease type Colorectal cancer
Cell type Fibroblasts
Cell type (subtype) Fibroblasts
Cell marker COL1A2, ACTA2, ENG
Frequency
PubMed ID 31744515
Journal Genome Biol
SCI IF 10.806
Evidence Fibroblasts highly expressed classical markers of ENG, COL1A2, and ACTA2 (Additional file 2 Figure S10b), while the remaining two clusters were composed of epithelial cells, characterized by the high expression of the Epithelial Cell Adhesion Molecule (EPCAM). Notably, one of the two clusters was characterized by specific expression of cell cycle-related genes including MKI67 and CDK1, as well as cancer-associated genes including S100A14, MUC13, and KRT7, and thus was defined as malignant cells
Title Systematic comparative analysis of single-nucleotide variant detection methods from single-cell RNA sequencing data
Authors Fenglin Liu et al.
Date 2019.11
Data available NA