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ID 3935
Class Mammalia
Species Homo sapiens
Tissue Prostate
Sample Tissue
Disease type Benign prostatic hyperplasia
Cell type Epithelial cells
Cell type (subtype) Epithelial cells
Cell marker KRT18
Frequency
PubMed ID 31094703
Journal JCI Insight
SCI IF 6.205
Evidence Supplemental Figure S6. Single-cell RNAseq; visualization of additional markers.(A) Two-dimensional projection (t-SNE plot) of single cell transcriptomes stratifies prostate tissue cells (dots) into distinct clusters, identifiable by characteristic expression of marker genes, including (B) KRT18 (all epithelium) (red intensity scales to maximum log2 expression), (C) PTPRC (CD45 antigen; leukocytes), and (D) VWF (Von Willebrand Factor; endothelium). (E) Normal prostate tissue cell subset, illustrating expression of (F) ESR1 (within fibroblasts). (G) BPH tissue cell subset, illustrating expression of (H) ESR1 (within fibroblasts). Insets magnify select cell clusters
Title Genomic analysis of benign prostatic hyperplasia implicates cellular re-landscaping in disease pathogenesis
Authors Lance W Middleton et al.
Date 2019.5
Data available All RNA-Seq and WES data are available from the database of Genotypes and Phenotypes (phs001698.v1.p1).