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ID 3143
Class Mammalia
Species Homo sapiens
Tissue Lung
Sample Tissue
Disease type Normal and tumor
Cell type T cells
Cell type (subtype) CD8 TRM rest
Cell marker CD8, GZMB, IFNG, CCL4, HOPX, CCL3
Frequency
PubMed ID 31624246
Journal Nat Commun
SCI IF 12.121
Evidence CD4+ T cells comprised 6_7 clusters:resting cells expressingCCR7, SELL and TCF7, (corresponding to naive or TCM cells);three activation-associated clusters expressing IL2, TNF, and IL4Rat different levels; TRM-like resting and activated clustersexpressing canonical TRM markers CXCR6 and ITGA113, 33;and a distinct regulatory T cell (Treg) cluster expressing Tregdefininggenes FOXP3, IL2RA, and CTLA4 (Fig. 1c). CD8+ T cellscomprised four clusters distinct from CD4+ T cells and included.two TEM/TRM-like clusters expressing CCL5, cytotoxicityassociatedgenes (GZMB, GZMK), and TRM markers (CXCR6, ITGA1); an activated TRM/TEM cluster expressing IFNG, CCL4, CCL3; and clusters representing terminally differentiated effectorcells (TEMRA) expressing cytotoxic markers PRF1 and NKG7(Fig. 1c)
Title Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease
Authors Peter A. Szabo et al.
Date 2019.9
Data available GSE120221