| Evidence |
To assign cell type identity to clusters, we chose cell-type markergenes based on literature, GAD1, GAD2 (inhibitory neurons)(Lake et al. 2016); SLC17A7, SATB2 (excitatory neurons) (Lakeet al. 2016); TAC1, PCDH8, DRD2, ADORA2A, PENK (spindle neurons) (Gokce et al. 2016; McCullough et al. 2018); PCP4, NECAB2, LMO7, CALB1 (Purkinje cells) (Uhlen et al. 2015); PDGFRA, CSPG4 (oligodendrocyte precursor cells) (McKenzie et al. 2018;Zeisel et al. 2018), GJA1 (astrocytes) (Zeng et al. 2012; McKenzieet al. 2018); MBP, MOBP, MOG (oligodendrocytes) (Zeng et al.2012); RELN (Cajal-Retzius) (D'Arcangelo et al. 1997); AIF1, CX3CR1, PTPRC, HLA_DRA (microglia) (McKenzie et al. 2018);A2M (endothelial vascular cells) (Zeng et al. 2012) |
