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ID 135
Class Actinopterygii
Species Danio rerio
Tissue Pineal Gland
Sample Tissue
Disease type Normal
Cell type Neural cells
Cell type (subtype) Neurons
Cell marker Elavl4
Frequency
PubMed ID 31178320
Journal Curr Biol
SCI IF 9.602
Evidence The cell cluster identified as rod-like photoreceptors show high expression of exorh (exo-rhodopsin), the pineal specific opsin [S1], as well as rods transducin protein subunits-encoding genes, gnat1 (guanine nucleotide binding protein, alpha transducing activity polypeptide 1) and gngt1 (guanine nucleotide binding protein, gamma transducing activity polypeptide 1) [S2]. The cell cluster identified as retinal-pigment epithelium like express agrp2 (see main text). The cell cluster identified as Muller glia-like express the classical markers of Muller glia, clu (clusterin), vim (vimentin) and Dkk3b (dickkopf WNT signaling pathway inhibitor 3b) [S3]. The cell cluster identified as macrophages/microglia express the microglia markers, apoeb (apolipoprotein Eb) and cd74a [S4]. The cell cluster identified as neurons express neuronal markers such as elavl4 (elav like RNA binding protein 4/huD). The cell cluster identified as cone-like photoreceptors express the cones transducin protein subunits-encoding genes, gnat2, gngt2a and gnb3b (guanine nucleotide binding protein, beta polypeptide 3b) [S2], as well as opn1lw1 (opsin 1 longwave-sensitive 1), the cone red-sensitive opsin [S5]. One cell cluster express genes that are involved in diverse cellular processes, and therefore we simply termed this cluster as ‘cluster 4'
Title Agouti-Related Protein 2 Is a New Player in the Teleost Stress Response System
Authors Inbal Shainer et al.
Date 2019.6
Data available GSE123778