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ID 132
Class Actinopterygii
Species Danio rerio
Tissue Pineal Gland
Sample Tissue
Disease type Normal
Cell type Rod-like photoreceptors
Cell type (subtype) Rod-like photoreceptors
Cell marker Exorh, Gnat1, Gngt1
Frequency
PubMed ID 31178320
Journal Curr Biol
SCI IF 9.602
Evidence The cell cluster identified as rod-like photoreceptors show high expression of exorh (exo-rhodopsin), the pineal specific opsin [S1], as well as rods transducin protein subunits-encoding genes, gnat1 (guanine nucleotide binding protein, alpha transducing activity polypeptide 1) and gngt1 (guanine nucleotide binding protein, gamma transducing activity polypeptide 1) [S2]. The cell cluster identified as retinal-pigment epithelium like express agrp2 (see main text). The cell cluster identified as Muller glia-like express the classical markers of Muller glia, clu (clusterin), vim (vimentin) and Dkk3b (dickkopf WNT signaling pathway inhibitor 3b) [S3]. The cell cluster identified as macrophages/microglia express the microglia markers, apoeb (apolipoprotein Eb) and cd74a [S4]. The cell cluster identified as neurons express neuronal markers such as elavl4 (elav like RNA binding protein 4/huD). The cell cluster identified as cone-like photoreceptors express the cones transducin protein subunits-encoding genes, gnat2, gngt2a and gnb3b (guanine nucleotide binding protein, beta polypeptide 3b) [S2], as well as opn1lw1 (opsin 1 longwave-sensitive 1), the cone red-sensitive opsin [S5]. One cell cluster express genes that are involved in diverse cellular processes, and therefore we simply termed this cluster as ‘cluster 4'
Title Agouti-Related Protein 2 Is a New Player in the Teleost Stress Response System
Authors Inbal Shainer et al.
Date 2019.6
Data available GSE123778